FB2024_04 , released June 25, 2024
Aberration: Dmel\Df(2L)BSC111
Open Close
General Information
Symbol
Df(2L)BSC111
Species
D. melanogaster
Name
FlyBase ID
FBab0040373
Feature type
chromosomal_deletion
Computed Breakpoints include

[28F5-28F5];[29B1-29B1];

Features within 28F5--29B1
Genomic Maps
Sequence coordinates
2L:8,240,266..8,240,266 (Df(2L)BSC111:bk1)
(Bloomington Drosophila Stock Center, 2008.8.7)
2L:8,362,842..8,362,842 (Df(2L)BSC111:bk2)
(Bloomington Drosophila Stock Center, 2008.8.7)
Member of large scale dataset(s)
Dfs_BSC_set2

A set of ~800 largely isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Designed to fill gaps in deletion coverage and breakpoint placement; also used to replace older available deficiencies that have not been molecularly mapped.

(Cook et al., 2012)
Nature of Aberration
Cytological Order
Progenitor
PBac{WH}f05484
(Deal and Cook, 2005.6.1)
P{XP}d05178
(Deal and Cook, 2005.6.1)
Mutagen
FLPase
(Deal and Cook, 2005.6.1)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Deal and Cook, 2005.6.1)
Breakpoints

28F5;29B1

(FlyBase Curators, 2008)
Causes alleles
Carries alleles
Transposon Insertions
P+PBac{XP5.WH5}BSC111
(Deal and Cook, 2005.6.1)
Formalized genetic data
Genetic mapping information
Comments

Breakpoint based on release 3 sequence coordinate from Thibault et al., 2004, Supplementary Table 2 (FBrf0174227) or 3 (FBrf0174228), converted to release 5 coordinate.

(Bloomington Drosophila Stock Center, 2008.8.7)

Breakpoint from FlyBase's release 5 sequence location of progenitor insertion.

(Bloomington Drosophila Stock Center, 2008.8.7)
Comments on Cytology

The cytological breakpoints of Df(2L)BSC111 predicted from the Release 3 genome coordinates of the progenitor insertions are 28F5;29B1.

(Deal and Cook, 2005.6.1)
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Btk
(Deal and Cook, 2005.6.1)
mtsh
(Bergner et al., 2010)
Partially deleted / disrupted
Molecular Data
Completely deleted
Mettl14
(Kan et al., 2017)
wol
(Shaik et al., 2011)
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
LKRSDH
(St Clair et al., 2017)
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location
Phenotypic Data
In combination with other aberrations

Inferred to overlap with: Df(2L)BSC228.

(Christensen and Cook, 2006.12.5)

Inferred to overlap with: Df(2L)BSC235.

(Christensen and Cook, 2006.12.5)

Inferred to overlap with: Df(2L)BSC200.

(Christensen and Cook, 2006.8.30)

Lethal in combination with Df(2L)BSC200.

(Christensen and Cook, 2006.8.30)

Inferred to overlap with: Df(2L)TE29Aa-11.

(Deal and Cook, 2005.6.1)
NOT in combination with other aberrations

Fails to complement Df(2L)TE29Aa-11.

(Deal and Cook, 2005.6.1)
Stocks (1)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 
Synonyms and Secondary IDs (3)
References (20)