Beginning with the last FlyBase release for 2011 (FB2011_10), you will see a new and more biologically meaningful organization of the genomic data presented on GBrowse for D. melanogaster. The explosion of genetic and functional genomic data sets for D. melanogaster necessitated the subdivision of these data into different ‘data source views’ to efficiently utilize the space and optimize performance, but the original subdivisions grew organically instead of according to optimal biological meaning. This has been corrected. There are currently four views for D. melanogaster (see figure below):
When using GBrowse, it is possible to toggle between the various views simply by selecting a different option from the Data Source menu. The genomic region that is being viewed will remain the same.
Help documentation is available for every track grouping. Click on the link just above the Tracks selection area of each GBrowse view page. Each track name is also a link to the help document for the view; these links will scroll the help page directly to the documentation about that track.
We invite your feedback on this reorganization. In particular, if there are certain tracks that are currently only available on different views that you’d like to be able to see in a single view, please let us know using the 'Contact FlyBase' form.